Heard back from the dealership's bodyshop that they will be replacing my 4 doors, hood, tailgate and all related hinges. Stripped down a couple of the doors and came to a conclusion that they are not worth repairing. I just hope the paint matches and that I don't get the issues again which most likely I will as I don't think they use a new process at the plants. Oh well. Good enough for the next couple years I guess.