I found the same issue (2019 JLUR to 2021 4xeR) with the center console USB, so annoying. I have a wireless carplay dongle and now it's hanging on my dash. I planed on a nice clean install in the console.Question for you: does CarPlay/Android Auto work if you plug into the USB port on the center console? Had a 2020 Rubicon; no issues. Traded to a 2021 4xe Rubicon (insert eye roll) and the USB port in the center console disconnects randomly (every x minutes) when connected to CarPlay. You have to use the USB port in the dash to get it to stay connected.
Blindly hoping that whatever magic flash your Wrangler has that mine doesn’t has fixed that